Bioinfo is PAN(PlantArrayNet) and FSTVAL(Flanking Sequence Tag Validator) server
PlantArrayNet (PAN), a new version of RiceArrayNet (Lee et al., 2009), provides co-expression information between genes in terms of correlation coefficients from accumulated microarray data. Given the correlation of a gene pair, the degrees of closeness between gene expression profiling are calculated and are visualized in a relational tree and a relational network. In addition, PAN supports scatter plots of log ratios between genes and links them to pathway maps, while providing a common cis-element list of promoter regions that are involved.
FSTVAL, to manage bulk flanking sequence tags. The FSTVAL automatically evaluate the FSTs and find best mapping position of the FST against genome sequence.